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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PARM1_RAT
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCKALITLC IFAAGLRVQG SPTPTLLPVS LTTKSTAPMA TWTTSAQHTA MATTPVASAT  60
   61 HNASVLRTTA ASLTSQLPTH PREEAVTSPP LKREVNSTDS SPTGFSSNSS GIHLAPTPEE 120
  121 HSLGSPETSV PATGSQSPTL LFSQGPTSAS TSPATSPSEP LSASVTSNHS STVNNIQPTG 180
  181 APMAPASPTE EHSSSHTPTS HVTEPVPKEK SPQDTEPGKV ICESETTTPF LIMQEVENAL 240
  241 SSGSIAAITV TVIAVVLLVF GAAAYLKIRH SSYGRLLDDH DYGSWGNYNN PLYDDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle