YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66911159, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGIKALVSL SFGGAIGLMF LMLGCALPQY NKYWPLFVLF FYILAPIPYC IARRVVDDTD  60
   61 AASNACKELA IFLTTGIVVS AFGLPIVFAR VQVIEWGACA LVLTGNMVIF STILGFFLVF 120
  121 GNNDDFSWQQ W

Type	Start	End	Confidence
Cytoplasmic	1	6	0.85
Transmembrane Helix	7	27	0.94
Non-Cytoplasmic	28	32	0.70
Transmembrane Helix	33	52	0.82
Cytoplasmic	53	68	0.68
Transmembrane Helix	69	89	0.94
Non-Cytoplasmic	90	97	0.60
Transmembrane Helix	98	121	0.91
Cytoplasmic	122	131	0.76