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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37590720, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESCTEQDM CTSEQGNGSP EEAFFSMADM FLLSLIVGLL TYWFFFRKKK EETIEFTKIQ  60
   61 PTVNNSVRES SFIEKMKKTG KNIVVFYGSQ TGTGEEFANR LAKDAHRYGV RGMAADPEEF 120
  121 EMADLSRLTE IENALAVFCM ATYGEGDPTD NAQDFYDWLQ ETDIDLTGLK YAVFGLGNKT 180
  181 YEHFNAMGKY VDKRLEELGA ERIFELGMGD DDGNLEEDFI TWREQFWPAV CEHFGVEATG 240
  241 EDSSIRQYEL VVHTDENMNK VYTGEMGRLK SYETQKPPFD AKNPFLANVT VNRKLNEGGD 300
  301 RHLMHLELDV TGSKIRYESG DHVAVYPAND TALVNKLGEI LGADLDTVIS LNNLDEESNK 360
  361 KHPFPCPTTY RTALTYYLDI TNPPRTNVLY ELAQYATDSK EQENLRKMAS SAQDGKGLYL 420
  421 SWVVESRRNI LAILEDVPSL RPPLDHLCEL LPRLQARYYS IASSSKVHPS SIHVCAVLVE 480
  481 YETKTGRENK GVATNWLKNK QPSDNGHKSS VPMYVRKSQF RLPFKPSTPV IMIGPGTGIA 540
  541 PFIGFIQERE WLKQQGKDVG ETVLYYGCRH EHEDFLYKDE LKRYHKDGVL TQLNVAFSRD 600
  601 QDRKVYVQHL LKDNKEMVWK LIHEDNAHIY VCGDARNMAR DVQNTFYDIV AEYGKIDHAQ 660
  661 AVDYIKKLMT KGRYSQDVWS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle