YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37590287, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSWVRFSGQ SQAKERVIRA AQYACTLIGY TLQKNGGSAE LISGLKQLES HLSLGRKLFR  60
   61 LGNSVEALES AKRAIHLSDL VLRFCITVSH LNRAMYFACD NILWVGKCGL SPKVDQNKWS 120
  121 ERSFRYYLFS LLMNLTRDLY EIKLLMEAET SGKHLSDKLS EDNGVVSRGS SSSRHPIALQ 180
  181 IRLLIHIFRS NPPLLLDLLK NSCDLFIPLD KLGLYKTNPG FVGLCGLTSS ILSILTLLHP 240
  241 WLKLKP

Type	Start	End	Confidence
Cytoplasmic	1	219	0.57
Transmembrane Helix	220	242	0.78
Non-Cytoplasmic	243	246	0.64