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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: S38AA_XENLA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASNWGLIM NIVNSIVGVS VLTMPFCFQQ CGILLGTLLL MLCTWMAHHS CMFLVKSASV  60
   61 SKRRTYAGLA FHAYGKVGKM MVETSMIGLM LGTCIAFYVV IGDLGSSFFA RLFGLEVSEG 120
  121 FRVFLLFSVS LCIVLPLSLQ RNMMAFIQSF SAMALMFYTV FMFVIVLSSF KHGLFSGQWL 180
  181 KHVSYIRWEG VFRCIPIYGM SFACQSQVLP TYDSLDDPSV KIMSSIFALS LNVVTTFYIT 240
  241 VGFFGYVSFP ETIAGNVLVN FPSNLVTEMI RVGFMMSVAV GFPMMILPCR QALNTLLFEQ 300
  301 QQKDGTFTAG GYMPPLRFKI LTLVVVFGTM LGGILIPNVE TILGLTGATM GSLICLICPA 360
  361 LIYKKIHKKG LASQFILGVG LLILVISTYT TLTVTEEPTQ IKSELLERID LKEEKDPEQI 420
  421 NSQKSDEKAK VEQPGDNRDK PKLPPKNPEE EQIKGPIEGP QKEKDTKKQE EVQLDRPDQG 480
  481 DIAVPVGEAH RHEPPIPQDE VAVDEKKDQG EREEKKESVV DINSTEKKDK QQINLEKEPE 540
  541 IKDQAEANKG INEPVPQKPP QEVNDPNKQQ LVNPPTPRLK EQPPFKDLEG IIKDLAVPVE 600
  601 IKKNAEIAEE KDNNDFANPV KAIENPPIKD EKNEQIPGDP GKESHVEPKA EDNQAEAGKA 660
  661 ELLDHAFLLQ VIKEQQVQQK RLLDQQEKLL EVIKEQHMEI HQQKGDEDQQ DKLEGNIADK 720
  721 NKEELKAEAR VAQKPLEGDK LENVGEVNAK VDKPAVEEHV VVVEKEQNPA LNQVVKGNVP 780
  781 DVKKNDHKIE APKINVEEVK VPISAGKHKK QSVQENLIHQ QDVDQGASDN YKQREKAVAA 840
  841 NKDYVLGHII QQETANPIDP ITLPDLQDKL GKLALHQTEP KQKPVKIAGI GEKKLGAVQE 900
  901 EKILVQKGQE AQADKVIQDN YNPVPDHGLH ENNNADAPAT INVEAKKEHI EKPKDGAVLE 960
  961 HDEGKQNRDL KLQNDMDLRR KKRDLALVQQ ENNGAQIISF HPVPNLKVND LRGALEARLN1020
 1021 QMVDGGLQVV QSRKIKQLID EEKNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle