YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PPT2A_XENLA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTASRPKALQ TFCLLLPLLV WMVDRSLCYK PVIVVHGLFD SSANFKNLLQ YINESHPGTN  60
   61 VTVLDLFDNK ESLQPLWKQV QGFKEAIYPI MQNAGRDGVH LLCYSQGGLI CRGLLQTMPD 120
  121 HNVDTFISLS SPQMGQYGDT DYLRYLFPTY VKSNLYRLCY TQMGQTFSIC NFWNDPHHHG 180
  181 IYVNVSDFLA PLNSERPEPN ATDWKKNFLR LRKMVLIGGP DDGVITPWES SHFGFYDENE 240
  241 TVLEMKYQMV YQDDTFGLRS MDYRGAITVY GVPGVVHTMW HSNQTVFKNC IEKWLT

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	296	0.99