YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|80477190, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEENKGSE QSGSDWKQFI YNPQKGEFMG RTASSWALIL LFYLVFYGFL AGLFTLTMWV  60
   61 MLQTLDDSVP KYRDRVSSPG LMISPKSAGL EIKFTQNKPQ SYMEYVQVLN TFLAPYNDSL 120
  121 QAKNELCAPG LYFDQDREGE KKSCQFNRTS LGICSGIEDP MFGYGEGKPC VIVKINRIIG 180
  181 LKPEGNPKIN CTSKTDDVSL QYFPENGKID LMYFPYYGKK THVNYVQPLV AVKISPSNFT 240
  241 SEEISVECKI HGSRNLKNED ERDKFLGRVT FKVKISE

Type	Start	End	Confidence
Cytoplasmic	1	37	0.86
Transmembrane Helix	38	61	0.90
Non-Cytoplasmic	62	277	0.90