YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27882199, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVGLRAS YHRALGRIEM MLPPKLRPIY NHPAGPKTVF FWAPIMKWGL VFAGLADMTR  60
   61 PADKLSTGQS AVLTATGLIW SRYSLVIIPK NWSLFAVNFF VGCAGGSQLF RIWKHNQELK 120
  121 AIDVQQEVKP

Type	Start	End	Confidence
Cytoplasmic	1	64	0.49
Transmembrane Helix	65	84	0.57
Non-Cytoplasmic	85	91	0.58
Transmembrane Helix	92	112	0.81
Cytoplasmic	113	130	0.71