YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27371040, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFIYVLSWL SLFVQVAFVT LAIAAGLYYL AELIEEYTVA TSRIIKYMIW FSTGVLICLY  60
   61 LFEKFPIIMI VVGLFTNVVY FGLLQTFPFI MLTSPNFILS CVLVVLNHYL AFQYFADEYY 120
  121 PFSEVLTYFT FCLWLIPFSF FVSLSAGENV LPSTIQQGDD VVSNYFTKGK RGKRSGILVI 180
  181 FSFIKEAILP SRQKIY

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.59
Transmembrane Helix	9	31	0.91
Cytoplasmic	32	43	0.62
Transmembrane Helix	44	62	0.83
Non-Cytoplasmic	63	64	0.37
Transmembrane Helix	65	87	0.67
Cytoplasmic	88	88	0.32
Transmembrane Helix	89	112	0.79
Non-Cytoplasmic	113	124	0.42
Transmembrane Helix	125	147	0.87
Cytoplasmic	148	196	0.51