YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TOM20_XENLA
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAVGKTSAI AAGVCGALLL GYCIYFDRKR RSDPNFKNRL REKRRKQKIA KERAGQSRLP  60
   61 DLKDAEAVQK FFLEEIQLGE ELLAQGDFEK GVDHLTNAIA ICGQPQQLLQ VLQQTLPPPV 120
  121 FQMLLTKLPT ISQRIGNAQN LSEDDVE

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.60
Transmembrane Helix	7	26	0.65
Cytoplasmic	27	147	0.59