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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CO6A1_XENLA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMLQGRLPL TVLHLFLLLG GGMTQQRPQG PIKDINGLPA QGPTVSVRPG PDPSDKVTFQ  60
   61 DCPVDIFFVL DTSESVALRV KPFKTLVTQV KEFTKKFIDK LTSRYYRCDR NLVWNAGALH 120
  121 YSDEVILINS LTRDMKTLRD NVETVEYIGK GTHTDCAIKR GIEEVLIGGS HQKENKYLIV 180
  181 VTDGHPLEGY KEPCGGLEDA ANEAKHLGIK VFSVAISPNH LEPRLSVIAS DASHRRNFTA 240
  241 TSAVGLTDDE IDNTIDTIID MIKENAEQGC CTYECKPSRG LSGPSGPPGY EGEIGKPGLP 300
  301 GDRGLPGDPG RQGDIGPVGY QGMKGDQGIR GEKGGRGAKG SKGDKGKRGI DGVDGQKGED 360
  361 GYNGLPGCKG SPGFDGAPGS SGPKGDPGPY GTKGEKGVPG TPGTGGRPGN TGNTGDKGDP 420
  421 GSNGLAGEKG ESGDEGDAGA DGSPGKRGEA GELGPPGVSG GRGARGEKGE PGPPGDQGRD 480
  481 GPAGPFGDPG EAGPQGPKGY RGDEGPRGPE GPKGPRGAKG LPGEQGIAGE RGDDGRPGNG 540
  541 TDGFPGFQGY PGSRGDPGSN GTKGYPGPKG DEGEQGEPGD DNVSPGPPGP KGAKGYRGPE 600
  601 GPPGPPGPGG PPGPDECEIL DIIKRMCSCC ECTCGPLDLL FVLDSSESIG LSNFQISKDF 660
  661 ILKVIDRLSR DEHVKFDADN SHVGVVQYSH GQTQEVVAMG DSSIQSIGQL KEAVKNLKWI 720
  721 AGGTWTGEAL AFTKDNLLKR FTLEKKIALV LTDGHSDILR DKTPLNTLCE VTPVVSVGVG 780
  781 DIFQNAPNSD QLVQISCGGK PYSKGLSLQR TSFAELLDDG FLHNVTSHMC SDRKCPDYTC 840
  841 PITYEGPADI TMLVDSSTRV GNQHFQTSKS FVKLLAERFL KAKPPPSGSA RVSVVQYSGQ 900
  901 NQQIVEAQFL TNYTVLEVPV DNMQFINGAT NVVSALRAVT ELYREDSLAG VNKKLLVFSD 960
  961 GNTQEEKGLL KVVQDAQSAG IEIYVLAVGS RLNYPNLQVM LTGSAADIAG PFPEERLFRV1020
 1021 PDYTSLLQGV RYQSISRRIA LKSSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle