YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77748125, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGPAASATN VAASGRSPSK AVAPRTAGST VRQRKNASSS TRSAGRTTSA GTGGMWRFYT  60
   61 EDSPGLKVGP VPVLVMSLLF IASVFMLHIW GKYTRS

Type	Start	End	Confidence
Cytoplasmic	1	42	0.70
Transmembrane Helix	43	60	0.36
Non-Cytoplasmic	61	67	0.62
Transmembrane Helix	68	91	0.88
Cytoplasmic	92	96	0.62