YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|27769132
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAEDGRGYN VPCPQCSEIN WAISDEGRYY CMSCHTIIEK TREVEDSEVF VNLGKIQYIS  60
   61 RGLRKKRKQE KGWEWYVCEG FQFILIKQAE SLQALGVAPQ IKDEIICTFW RRYLQKTNQA 120
  121 YVKRPVYRNT LNLRESDSSA TELDSETDEF SDGITTDASD RLSVATEDIA SGSESAVSIQ 180
  181 SGSVDGVSHT KMSKNWKPWN YVKMSMPMTL AFCYLALLWL RASITLSDLL RFVFEKRIPY 240
  241 FNAHQYLPEE IKLYGQDVRI FRMQSFPVYN DILNKAYELG HYLDLPRFPE IIKNCYLHPN 300
  301 VLCMKYLMEA NLPDELHHWT CQVAEKTGTD DLHLLTFDPA CKKARHIRYD VQAVALIIVV 360
  361 LKLLFALDDN TEWQLSMFAE RMNQRDKEKP IFEFQSWYQT VRSCYEKAQQ ALEEEYGRFT 420
  421 WKSDCLLYYS HTSKAVLQKR KQMSENLHRQ FSKLAGAAPD TGKQGPSSFL FKWDEQNTDR 480
  481 ICFHGHSLEA ILQQGDKPAT AINTHYWLNS LKKCKSRICQ HSELYEQSNF PRSYHFIVSL 540
  541 FAFLLRVEHC VVHHEVCLIE ETFFQEFQGK KNKQKQKPRK QN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle