YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|38048619
Protein type:	Transmembrane
Type Confidence:	0.49
Topology Confidence:	0.30
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NTGAWILLGL LAGIAALSSA ATIQQSGDKT ILQNNGHTFL SSGAGQIIRG PDGRTVLIGS  60
   61 NGQRMVVNGD SSEEDNSPEY GTRGHHNNVI INGGSGSSVY HNDGRGFIVG NANEDSYITG 120
  121 DGRSLRVING AIELNDHGQV YVFHPRAAGV YEKETVPVNG QTALVEYSNG DIVVELADHT 180
  181 V

Type	Start	End	Confidence
Cytoplasmic	1	4	0.30
Transmembrane Helix	5	21	0.47
Non-Cytoplasmic	22	181	0.83