YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|194187422, gi...
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATAVPHCPP KQDLPPPGGY KKIPFARVPP KSYFTGFTTI GTYVVVTAVG LGVYYLTAKK  60
   61 VKRDEIEMRS AQNVIFPILV AERDREFLRQ LRRNRDEEAE LMKNVPGWEV GTWYGEPVFK 120
  121 TLPEDTLVTP IFKEFYAHSD WKSYAKRAHL KLWS

Type	Start	End	Confidence
Non-Cytoplasmic	1	33	0.87
Transmembrane Helix	34	58	0.78
Cytoplasmic	59	154	0.77