YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|124014034, gi...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRLINSAV LRQLASQLPK SAQVGSVAAV HTLDKIGKRE IVGYGWNGTA CYADRVDYPL  60
   61 PAVRFREPTN EINALRAKEQ GDWKKLSAQE IKALYRASFC QTIAEVQAGS GEWKLHLGIA 120
  121 LLFSAAAIWV AVLMNLFVYD ELPVTFDEEH QKAQLQRIID LEMNPVTGLT SKWDYENKKW 180
  181 KN

Type	Start	End	Confidence
Cytoplasmic	1	116	0.88
Transmembrane Helix	117	138	0.86
Non-Cytoplasmic	139	182	0.91