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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37962888, gi|...
Protein type: Transmembrane
Type Confidence: 0.60
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAALAACAL PSLRILNTKP RFRCSFSNPS LPISPNSLIT RKSSRFTTAV SSPPSSSAAT  60
   61 STNSPPEPEA LFEPGSDKFD WYANWYPVMP ICDLDKKVPH GKKVMGIDLV VWWDRNEKQW 120
  121 KVMDDTCPHR LAPLSDGRID QWGRLQCVYH GWCFNGSGDC KLIPQAPPDG PPVHTFKQAC 180
  181 VAVYPSTVQH EIIWFWPNSD PKYKNIIETN KPPYIPELED PSFTKLMGNR DIPYGYDVLV 240
  241 ENLMDPAHVP YAHYGLMRFP KPKEKIDREG GKPLEINVKK LDNKGFFSKQ EWGYSNFIAP 300
  301 CVYRSSTDPL PEQEHEYPAP AASDKAALSK RRLSLIFICI PVSPGRSRLI WTFPRNFGVF 360
  361 IDKIVPRWVF HIGQNTILDS DLHLLHVEER KILERGPENW QKACFIPTKS DANVVTFRRW 420
  421 FNKYSEARVD WRGKFDPFLL PPTPPREQLF DRYWSHVENC SSCKKAHKYL NALEVILQIA 480
  481 SVAMIGVMAV LKQTTMSNVA RIAVLVAAVL SFAASKWLSH FIYKTFHYHD YNHAVV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle