YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56606004, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRNGGIVGN GGQPWVLRRV RLTWLSFMLF FILVFFPLIA HYYLTTIDEA GGPDKRIFGP  60
   61 RPGGELCEAK HVQDLCRIRE SVSEELLQLE AKRQELNGEI ARLNLRIEAC KRSIDSAKQD 120
  121 LLQLKNVISQ TEHSYKELMA QNQPKLSLPV RLLPDKDDPG YPPPKSPQSC RLHSCFDYAR 180
  181 CPLTSGFPVY VYDTGSYPWG EKLDPLVKQA FASSVKSSVY VTDNPNIACL YIALVGEIQE 240
  241 SPSSPLASPS DLEKQLKALP YWRSDGHNHL LVHLSINSLT QNFLYNVSTG RAAVAQSTFF 300
  301 ERQYREGFDL VVSPLVHALS EPNFLEVPPQ VPVKRKYLFT FQGEKVESLR SSLLEAPPQS 360
  361 FEEEMEGDPP ADYDDRIIGT LKAVQDSHLD QVLVEFTCKN QAKPSLPTEW ALCGKREDRL 420
  421 EVLKVSTFAL VISPGDGQLV ASAGCSMRLF EALEVGAIPV VLGDHSKLPY HHLIRWSEAV 480
  481 IMVPKPRITE LHFLLRSISD NDLLAMRRQG RFLWETYFST SESIFNTILA SVRTSIQIPA 540
  541 APIREEPAQE IPHKAGKLAG TDANLADNGD LDLGPVEVEP PYASPRFLRN FTYTAADVYR 600
  601 TWNRAPGPFH LFPHTPLDPV LPSEAKFLGS GTGFRPIGGG SGGSGKEFQA ALGGNVPREQ 660
  661 FTVVMLTYER EEVLMNSLER LNGLPYLNKV VVVWNSPKPP SDDLLWPDIG LPIVVVRTGK 720
  721 NSLNNRFLPW DAIETEAILS IDDDAHLRHD EIMFGFRVWR EARDRIVGFP GRFHAWDLNH 780
  781 QSWLYNSNYS CELSMVLTGA AFFHKYYAYL YSYVMPRAIR DMVDEYINCE DIAMNFLVSH 840
  841 ITRKPPIKVT SRWTFRCPGC PQALSHDDSH FHERHKCINF FVKVYGYMPL LYTQFRVDSV 900
  901 LFKTRLPHDK TKCFKFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle