YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114684615, gi...
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSGGSLPFC CYLPSVSSQL LLRESYCNFM KRPQCKSSKL MLSRDLLSGQ KYCRCLLWAL  60
   61 PDHPRRRGPT SANALPLSAE LVMLLEWWSC TECTLFTDQA TVERFGKEHA VIILNHNFEI 120
  121 DFLCGWTMCE RFGVLGSSKV LAKKELLYVP LIGWTWYFLE IVFCKRKWEE DRDTVVEGLR 180
  181 RLSDYPEYMW FLLYCEGTRF TETKHRVSME VAAAKGLPVL KYHLLPRTKG FTTAVKCLRG 240
  241 TVAAVYDVTL NFRGNKNPSL LGILYGKKYE ADMCVRRFPL EDIPLDEKGA AQWLHKLYQE 300
  301 KDALQEIYNQ KGVFPGEQFK PARRPWTLLN FLSWATILLS PLFSFVLGVF ASGSPLLILT 360
  361 FLGFVGAASF GVRRLIGVTE IEKGSSYGNQ EFKKKE

Type	Start	End	Confidence
Cytoplasmic	1	327	0.72
Transmembrane Helix	328	350	0.82
Non-Cytoplasmic	351	355	0.60
Transmembrane Helix	356	376	0.86
Cytoplasmic	377	396	0.90