YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55646669
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPSKSLVME YLAHPSTLGL AVGVACGMCL GWSLRVCFGM LPKSKTSKTH TDTESEASIL  60
   61 GDSGEYKMIL VVRNDLKMGK GKVAAQCSHA AVSAYKQIQR RNPEMLKQWE YCGQPKVVVK 120
  121 APDEETLIAL LAHAKMLGLT VSLIQDAGRT QIAPGSQTVL GIGPGPADLI DKVTGHLKLY 180
  181

Type	Start	End	Confidence
Non-Cytoplasmic	1	15	0.66
Transmembrane Helix	16	38	0.80
Cytoplasmic	39	180	0.71