YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|218201627
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDVVAMAGQ AYMRQLQAHP LRTKAITSGV LAGCSDAIAQ KISGVPNLQR RRLLLIMLYG  60
   61 FAYAGPFGHF LHKLMDRFFK GKKGKETTAK KVLVEQLTAS PWNNMMFMMY YGLVVEGRPF 120
  121 SQVKSKLKKD YASVQLTAWK FWPIVSWINY EYMPLQLRVL FHSFVASCWA VFLNLKAARS 180
  181 IATSKKA

Type	Start	End	Confidence
Cytoplasmic	1	52	0.66
Transmembrane Helix	53	72	0.91
Non-Cytoplasmic	73	156	0.68
Transmembrane Helix	157	175	0.87
Cytoplasmic	176	187	0.82