YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|45736098, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGNKQSLIY SFVAKGSVVL AEHTAFSGNF STIAVQCLQK LPPNTSKSTY SCDGHTFNFL  60
   61 VDRGFVFLVV ADEAVGRSVP FVFLDRVKED FMQRYGSSID EEGQHPLADD ADDDDFLLED 120
  121 RFSIAYNLDR EFGPRLKDHM LYCINHPEEI SKLSKVKAHL TEVKGIMMDN IEKILERGEK 180
  181 IELLVGKTET LQSQADSFHR HGRELRRKMW LQNLRFKLMV GGAVAALILF LWLIICGGFK 240
  241 C

Type	Start	End	Confidence
Cytoplasmic	1	215	0.89
Transmembrane Helix	216	236	0.95
Non-Cytoplasmic	237	241	0.78