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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50947025, gi|...
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEVFPVVD LRVLTQSDLD ELAAASAHAV DPRSSCPDRA VFNESAGSRK QTFSRVRFVP  60
   61 AAAAAAAAAS ASAAAAAKLP RGNDKEDSFI AYHLRRLFAP DDPSLIENPS FPQTQTLARS 120
  121 PSPDPDQLTT NSRGVSVDLV SLSRLADPYD AELGKRTARM TTEEELMGFI SSLAGQWVNQ 180
  181 RMRRKLVDAS FFGDHLPSGW RLQLGIERKD RKAWVNCFSY VSPKGQSFAT CQEVSAYLMS 240
  241 LLGYPEFKTD NIEYGSTQQH GLCADDGVNV LGVQHQIGTS MDSQSNLPVA SATFYSHSRD 300
  301 QDETVADDIN SYECQQCNLT FHGQSAYAHH LITFHKVSSK RRKSNKVSKF GEPVIGKDGK 360
  361 FECPVCNKTF EEQSRYFGHI GSHAKYQGLT PEAFLQTFSG KVGNNSFAGL SSSLQVLVGS 420
  421 PQLNEKTTAC EARSQHHDCS TKHGGNSTRG IDLFNSNHPA NFNGHNQSWC RSDEIPPTTE 480
  481 AQSTWTYRNN EMNCADRTVP RTVPQPNDHE DCRVSGFAEA TNFNDQAGRH QGFRPFSFGT 540
  541 TNHCQGQIID HAVAASKHAE VNNSMKSRDV NLNSRLNTIS FPIATANNET STALNDVNRS 600
  601 CITGKGFSGS FSNNDGAASI VLPSSGLNNK ISSSLGVADR SSIAARSFNA GYVYENGASE 660
  661 ANNIGNKNNT MVYQTSLAMR PLSPGKQSSG VASRRTAAVV SERHGGQVVR HPRTASSVYM 720
  721 PEQGPGWL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle