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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|42409443, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRAARRACH WVWVGSLSLS VSPSWLLPQG RNCIPAGRVI ERGGQRGERR EIDLIEGKET  60
   61 HKAFKPQNPN PPSPHPLAMA PKRPAAASGS ASEASDCEAG GAGRRRSPSR SRSPSRSASP 120
  121 SRSRSKTPPH NAAVLSSTPA SAAVDFVAAS DSDAGADADA RLASPRRSRE RSPRLHSDSD 180
  181 NSAAATAEAA EAAAAAAFDD GDDEGNATPP PRSRRSSRVE ATGVKPISSR PMDASRRPAA 240
  241 ASSQSQRRSK RPRSSPTQHS PEQHKRPPRV WNPQDEVTIL RALISYRAKN GALPGSSQDT 300
  301 GKLHNMIRGQ LSVKASTTQL SDKVRRLKHK YNLILTRVTK SGRDPDLPTE HDREVYELSK 360
  361 KVWGTKSGGA GAGSGGGGGG GGGRVYENAE VVQSDEEQGS RDDSDEDMES GWDDRDHRNR 420
  421 RLKAIVVANG NGNAVTGGRS VHGNGSGKGD VADKGKDMYP YLWEAVEELS KEHPSGTAFR 480
  481 KAFGVLDGSR ARAMEEKLNR FRLSEIRQQL RRMDLMKETI KMVLDALEGS DL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle