YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125560185
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASFLEIQP SELSFPFELL KQSSCSMQLT NKTDHYVAFK VKTTNPKQYC VRPNIGVVLP  60
   61 GSTCDVTVTM QAQREAPPDM QCKDKFLVQS VAAENGATTQ DISAEMFNKV AGKVVEEFKL 120
  121 RVVYVPTTTS SAMPEDSEQG SSARPFAQEN GIHNSTMPQP VFRSSAEPTK ERPTEPSSMI 180
  181 SKLNEENRVA IQQNQKLRHE LELLRKESSK SSGGFSLTFL AIVGLLGIIV GYILKKT

Type	Start	End	Confidence
Non-Cytoplasmic	1	212	0.60
Transmembrane Helix	213	234	0.94
Cytoplasmic	235	237	0.55