YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37681980
Protein type:	Transmembrane
Type Confidence:	0.48
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTMAVAETS AVCQFRHLRK NMANKWRCSI ALAVLSLTGC AYIPQKPLVE GATTAAPSVA  60
   61 TAPVPNGAIF QVVQPVYYGY QPLFEDRRPR NIGDTLTITL QENVSASKNS SANASRNGKN 120
  121 TFSAALTPRF LKGLIGGDKT DLDMEAENTF GGKGGANANN TFKGTITVTV DRLLANGNLH 180
  181 VVGEKQIAIN QGTEFIRFSG VVNPRTINAN NTVSSNQVAD ARIEYVGNGY INEAQNMGWL 240
  241 QRFFLNVAPF

Type	Start	End	Confidence
Cytoplasmic	1	25	0.46
Transmembrane Helix	26	42	0.47
Non-Cytoplasmic	43	250	0.89