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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37699520
Protein type: Globular with Signal Peptide
Type Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRLDRLFI LLETGSTAAT RQAAAKQIGE VQKLYPHELH ALLNRLVGYL HSTSWETRIA  60
   61 AAQTVEAILK QVPPWQPEFQ VLPKKERCAT NTATAAAAAE EDSCQSSGSN STTASERLLS 120
  121 FDEFDLQQIL HKGARLIGSE GNEFDVQEEQ PASGGGEEDR SLASRLSRQR AVLNDKLGLT 180
  181 TAAKLGVNLT DMITDEDVAL NRSGSTYNVN AEKLPVEHLL NIKTAANGSG QAPLSCREMN 240
  241 RAKRKVCQNT SGCSVTAVTP TCSRRNSNSN HSTGSNHSSN GTTGAAIEEP EKKKLKSTDR 300
  301 QEIFYSLNAA VPDATGTWVD AVSWPLENFC SRLFIDLFHA KWEVRHGAAT ALRELINQHA 360
  361 QGAGKAVLQT REQMDEAHSR WLEDAALRLL CVLCLDRFGD FVSDQVVAPV RETCAQVLGT 420
  421 LVKEMEASKV QRIVNILLQL IQHKNEWDVR HGGLLGLKYV FVVREELLPI YLPQSISNIL 480
  481 IGLLDAVDDV GAVAAATLIP VSSWLPKLLN PAQVSSIVKM LWDLLLDQDE LTSACNSFMG 540
  541 LLAAILCLPN AARWVEMDAM AILVPPLWPF LSHSTSSVRR STLKTLMTLT SADRVKSEPK 600
  601 DENQVKEEAD KEEMKLNFGV SDWKWELLQQ ALRHIYQRIL VEPQADIQAL ARQVWSNLIQ 660
  661 HADLGALLHA ACPFVSSWIC LSMQPPRLAF DAGVLIRAGG DVSTPGSTSR KRTPRIGDEL 720
  721 GGNILAQSNA SLKLYLGGSE ATPLDVRDAN FMRARISSSR ALGALSHYLV QPAPGVVYTP 780
  781 QTESPTDCYT KVLLGHLNAH SAVQRIVCGL IIAFWALEDE PVRPGPPNLQ EKLHQCVSEY 840
  841 VYYDEVAISL TRLLQEAQDF IATLKQNKIP INDFNNAKIL TLDQIEAVAT TLSENLRSYP 900
  901 LKPKVLDMLE ERRRRAAFRP PTSRQPVSKA AIMSVLRQHS LAPSAALHCL PDKLNPVVKP 960
  961 LMESIKREQC LQLQQLSAEF LVHLMDQVCD RNPSPNSKIL NNLCTLLRSD PEFTPKLVMP1020
 1021 LETLKQTPVS SEVINNCVYY GILTLALQQT VTTTNTRRCG RCNNSHCYYG PQGPWATATG1080
 1081 EILSATNATA HIELKAHEAK EAEANECRIQ RLGAACAIEK LCRIFGEQII EKVAVFQHLM1140
 1141 FGKVEQFVKE AYDWRLGSLL PDLGVCNELV SSMQLIETAA PHLHVALHPQ MFALLPSLGF1200
 1201 IVCHPLKAVR HMAARCIAVL AEIDACQTMQ FVVHDLLPLL GKIEQLIERQ GAIEAIERVV1260
 1261 SRLQIKVVPY IVLLVVPLLG AMSDPDESVR LLSTHCFANL VQLMPLDGKT EQLKSDPLQA1320
 1321 RKTRDREFLD YLFNPKSIPN YKVPVPISVE LRCYQQAGIN WLWFLNKYNL HGILCDDMGL1380
 1381 GKTLQTICIL AGDHMHRQTA NLANLPSLVI CPPTLTGHWV YEVEKFLDQG SVLRPLHYYG1440
 1441 FPVGREKLRS DIGTKCNLVV ASYDTVRKDI DFFSGIHFNY CVLDEGHIIK NGKTKSSKAI1500
 1501 KRLKANHRLI LSGTPIQNNV LELWSLFDFL MPGFLGTEKQ FVQRFSRPIL SSRDAKSSAK1560
 1561 EQEAGVLAME ALHRQVLPFL LRRVKEDVLK DLPPKITQDL LCELSPLQLR LYEDFSNKHL1620
 1621 KDCLDKLGDS SSASMVTENL SAKTHIFQAL RYLQNVCNHP KLVLRQSEEL TKVTSQLALS1680
 1681 NSSLDDIEHS AKLPALKQLL LDCGIGVQTE SVSQHRALIF CQLKAMLDIV EQDLLRRHLP1740
 1741 SVTYLRLDGS VPASQRQDIV NNFNSDPSID VLLLTTMVGG LGLNLTGADT VIFVEHDWNP1800
 1801 MKDLQAMDRA HRIGQKKVVN VYRLITRNSL EEKIMGLQKF KILTANTVVS AENASLQTMG1860
 1861 TSQIFDLFNG GKDKGAESGS SAVQGTASGG MSMNTIIENL PELWSEHQYE EEYDLGNFVQ1920
 1921 ALKK

YRC Informatics Platform - Version 3.0
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