YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|48843828, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.68
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALASKLAQ MQAKACDAAR FAAKHGCAYH RALMEKNQKY VADPPTIERC QELSKQLFYT  60
   61 RLASLPGRYE AFWKEADQVK NLWRNRKDLN VEHAGVAALF GIELYAWFCV GEIVGRGFTF 120
  121 TGYHV

Type	Start	End	Confidence
Cytoplasmic	1	92	0.65
Transmembrane Helix	93	110	0.62
Non-Cytoplasmic	111	125	0.83