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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50932305, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGSALLDG SVLPPSRIVS ERQAGLPRRF MPEPATGREI VTLGEGRPAP CYPGRSVFFL  60
   61 PFAMAGLVPP FSSFFMDVLE FYDLQMAHLT PNAVMTLAIF AHLCEMFIGV RPSLRLFRWF 120
  121 FTVQSVSPPS VVGGCYFQPR GPVLNRYIPC VLRKKWDDWK SDWFYTPLAD EARLRLPSQP 180
  181 PAQAFSWRAP VDLGDGYDAV LDRLAGLRSQ GLTGAMVYGD YLRRRIAPLQ RRARGAWEYT 240
  241 GSEDYMRTHQ GVRWDWAPED FKIVVQRVLN LSSVEASLIP QGVLPLCSDP DRASILTIMQ 300
  301 AVGASEERAP RGHDGAGRSR RGEQSTPGGG RASGPRDGGP GSSRPADARG KRKQGGTPPP 360
  361 SPPRGGGAAR ASSRRPEGAT PTSQPEGERK KKRLRKMGGT EPSRGNLISP PRWSFNRPPR 420
  421 SEIPSRDAQD QPGPGDIPES GTSIGGPSRA ASSPRRLFPT PSVAPLSAEP LLQALAVANT 480
  481 TVLDGLSAQV EALQAERAEL DAAWARVEEG RRSVEAMVEV GRKAHRRHVS ELEARRKVLG 540
  541 EIAKEVEEER GAALIATTVM NEAQDTLRLQ YGSWEAELGK KLDAAQGVLD AAAARERRAA 600
  601 ETEVASRRRE EALEARAMAL EERACAVERD LADREAAVAI REATLAAHEA ACAEEESALR 660
  661 LREDALTERE RALGEAEAAA QRLADSLSLR EAAREEQARR NLEGARAERA ALNQRAAELE 720
  721 ARAKELDARA RSGGAAAGES DLAARLAAAE HTIADLQGAL DSSAGEVEAL RLAGEVGPGM 780
  781 LRDAVSRLDR AGRQAGLWGG RTVKYAANQG GLAQRLSEMA GTLQRLPEEL KGTIKSSSRD 840
  841 LARGAVELVL ASYQARDPDF SPWTVLDEFP PGTEDGARAQ VRDAADHIVH SFEGSAPQLA 900
  901 FALNSDEEGD DGGVGDSGDE AVDPGASE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle