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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50931551, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKGVHFTHT TLLTRITQPV GISHVGRPPS FHDKAFPKPT QVYHMPTRGV PDQQQFYPSC  60
   61 YSDFKFEGDR RYWHRVHEYR GATGWLQGDM AELAPTWRLR GCHAGRREVD DDPAANGRRV 120
  121 VAASGGANHG DTGKSEHTGR LFVMRGDEPT ARIRQREFDG GESRRRQPAG REEGNADEVT 180
  181 RDRFPTVRAS TRFRELDASV GLDGATPSEA SDVWVLRSSS GDGGESTASD GNGATTERAL 240
  241 HACSRHDRCG CLSRRRMVPA AAASTVAVFA NRRSGCLSRR RRHQPAQLPP SPTAVAAASA 300
  301 VAVVTRHRRR RHRSHLRRQP TGQIWPRPPL ATADMAMPPP PPPRHHSSRR RRQLAVPGSL 360
  361 PPRATNPAMR GPYPCIPALD LDAAVGFSSA PAPCPELRLA GAPTSLTASE GRESPAAAVL 420
  421 AAAWLCRRWL GRRRAGGGLR WLGLVHRATI TVPGCLTIRG PLSDLETPVL DPVQGLRFLF 480
  481 GGRLIFGPDA KSLLVSVSLI VVPVLVFCVF VARHLRHQFS TYNAGYAIPA VAVLFMIYVL 540
  541 TLLFITSAQD PGIVPRASHP PEEEFAYGNP LNGGTPGRLQ FPRVKEIMVN GMLVKVKYCD 600
  601 TCMIYRPPRC SHCSICNNCV ERFDHHCPWV GQCIGQRNYR FFFLFVSSST LLCIYVFAMS 660
  661 ALYIKFLMEE GYPTVWKALK HSPASLVLMI YCFIALWFVG GLTGFHSYLI CTNQTTYENF 720
  721 RYRSDNRPNV YDQGCLNNCL GVFCSKTKPS KHKFRAYVQE EVRAPVVNFG RQMEEEPAGG 780
  781 PRAKVEDDLE IGSDLLQISQ RRNYGDVDLE MGSQDCSEME GIPNAKLAIG SESQIPAIGS 840
  841 EVRVRHSSWD RRSGNWDMSL DVIGRSASDV IRRSASGHEA APPFQTETH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle