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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50931509, gi|...
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNAAAGDSA AELLLRAAAL VPPAHYALAA LLLACALLYR FLELHLIGDL LRGLRGGRVA  60
   61 LTFHPASHVY HRVASKCRSL HGRYLATPWL ASPHLQTLFL SISGRPPSFT YRRQLYTVRD 120
  121 GGTIALDWLL ASDCEEEDVG FCDGVISRDD STPLVVVIPG LTSDSTAAYV KHLVFSMASK 180
  181 GWNVVVGNHR GLGGISITSD CFYNAGWTED FREIVNYLHQ KYPQAPLFAV GTSIGANILV 240
  241 KYLGEEGEGT PVAGAVSICS PWDLLVTNRF IQRKLVQRCY DKALAIGLKG YAKLHQPVLA 300
  301 RLANWEDIRK SRSIREFDRH ATCVVAKYET VDTFYRRCSS ANYISNVSVP LLCISALDDP 360
  361 LCTREAIPWD ECRANKNIVL ATAPNGGHLA FFQGLTAGKL WWVGAVSEFL LALHDSPCMH 420
  421 RQKAQEHSLH TSLESSIDKS PYVNFMEDGM VTAVTNDDAN NSDSDNPISN EMELRNGMVG 480
  481 VQQDGIATEI QNECDGNRSQ ENVTPAQGPV GSQEQPKQNI DKIQDAIAPV KISINQLIRS 540
  541 QGRSVWLLTY IAFVTSWPFL GALGFILFRK KFRNSLPAKR L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle