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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50931439, gi|...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLETRYRP AGAPSIWRFD LFVDQPLNLL DDAMVPRGCR LWLMLPSGDL SVLGSSHRLD  60
   61 DTTKRRTPKS RIYKDVENFG VLVLEKNSGC KFKTLRYLLL AITSATFLTL LTPTFYEHQL 120
  121 QSSRYVDVGW IWDKPSYDPR YVSSVDVQWE DVYKALENLN DGSQKLKVGL LNFNSTEYGS 180
  181 WAQLLPGSAV SIVRLEHAKD SITWDTLYPE WIDEEEETDI PACPSLPDPN VRKGSHFDVI 240
  241 AVKLPCTRVG GWSRDVARLH LQLSAAKLAV ASSKGNQKVH VLFVTDCFPI PNLFPCKNLV 300
  301 KHEGNAWLYS PDLKALREKL RLPVGSCELA VPLKAKARLY SVDRRREAYA TILHSASEYV 360
  361 CGAISAAQSI RQAGSTRDLV ILVDDTISDH HRKGLEAAGW KVRVIQRIRN PKAERDAYNE 420
  421 WNYSKFRLWQ LTDYDKIIFI DADLLILRNV DFLFAMPEIT ATGNNATLFN SGVMVIEPSN 480
  481 CTFQLLMDHI NEITSYNGGD QGYLNEIFTW WHRIPKHMNF LKHFWEGDDD SAKAKKTELF 540
  541 GADPPILYVL HYLGMKPWLC FRDYDCNWNI PLMREFASDV AHARWWKVHD NMPEKLQSYC 600
  601 LLRSKLKAGL EWERRQAEKA NLEDGHWRRN ITDPRLTICY EKFCYWESML LHWGEKNPTN 660
  661 NNPVPATISS S

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle