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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90399281, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDSAHKAQY IDGQREMFKR LDESSPRSSV PSEVGGRSTL KFSMPSFGYD SFNPVRSFLS  60
   61 GVRKGSGRLK SLRQSLTSGA PKTAFAEDLK SFKKTIFDPQ EKFLFQMNWF CFLSCVFAVA 120
  121 VDPLFFFLPI IDGDDKSSCI GIDKKLAVTS TIIRTILDLV YLIRVFLQFR TAYVAPSSRV 180
  181 FGTGELVIDP MRIAIRYLKS YFVMDFFALL PLPQIVVWRY LHTLDGPDVP STKNALVWVV 240
  241 LFQYIPRLLR IFPVTKDLKR TAGVFIETAW LGAAYYLLWF MLAGHNVGTL WYFLTIERED 300
  301 SCWRSNCHSN DGCNKSYLYC SDNHTGNYTS WLSKRTELLS ACSTNSFQFG IFEQALVSGI 360
  361 LRPGNFISKI CYCFWWGLQN LSTLGQGLQT SIYPGEVLFS IAICVIGLIL FALLIGNMQT 420
  421 YLQSVAIRLE EMRVKKRDAE QWMHHRSLPP QIRERVRRYE RYRWLETRGV DEENLVQTLP 480
  481 KDLRRDIKRH LCLGLVKRVP LFENMDERLL DAICERLRPT LYTENEYILR EGDPVDEMHF 540
  541 ILHGCLESET TDGGRSGFFN KVQLKEGAFC GDELLTWALD PKSAANFPAS TRTVKALTEV 600
  601 EAFALCAEEL KFVASQFRRL HSRQVQHTFR FYSQHWRTWA ACFIQAAWRR YYKRKMAEQH 660
  661 RKEEEAANRQ SSSSHHPSLA ATIYASRFAA NALRGVHRLR SRASPTIVRL PKPPEPDFAV 720
  721 DEAD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle