YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90265233
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLAADQDT VSLVRRVSRA LNRRLTDLVG LLFHHKSAGS LGAVAGFAIA VVFAWKFLRS  60
   61 SPARPRRPPG PKRPLVGPAA PDSAARDAAE PANPGKLTTR QIVVKRLGGC RKVTCQLLGV 120
  121 VFEEITPQEL QTHATVRPSV VELLLEIAKY CDLYLMETVL DDKSEENALL ALESAGLFKT 180
  181 GGLMKEKVLF CSSEVGRTSF VRQLEADFHI DTSLDIISQL SRFIRCQLFV SSIEGGQLAG 240
  241 NVFNSPSLEQ FFS

Type	Start	End	Confidence
Non-Cytoplasmic	1	37	0.64
Transmembrane Helix	38	58	0.93
Cytoplasmic	59	253	0.64