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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|38346330, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRIFVQRGA AGSSSSSSRS GSQTLQQQQQ LQATSAVARE EELPPQPHQH PSELTASDNI  60
   61 TDHLVEDADN SSNSNKPLGL DDPTSESSSS AEERAVMEKP PKDDSSVIDP AFLVEELTGL 120
  121 QFSDQFEQEN LVQSGIGPSQ IAGAASHPPP PPAPPAPPPK PSSGNNGLRR MGSGSSNNAR 180
  181 IGSSRRPVAW PPVAVRSSAS GSRPSSPRSL ADSEGYNSAD EQGPCYASNY YDSERERMFE 240
  241 HDLRRVRGFE INKMAEDGNC LFRAVADQVY GDPEAYDMAR QMCVDYMERE RDHFSQFMTE 300
  301 GFTSYCRRKR RDKVYGNNME IQAFAEMYNR PIHIYSYSTE PINIFQGSYN TDVPPIRLSY 360
  361 HHGNHYNSVV DPRGLTVGAG LGFSSLRGTN NVDRDQVKAA IKAQQDQQIE NALLAEGRLY 420
  421 SDLELTEKEI ERMVMEASRA EYLKQQQQQL NFRESSTSGA EPSSSAAISG SSRSAGTADR 480
  481 VGEECFVLPD TVLTRSMQLL LAMGFNYIQV MEAYSIFGED VDSMIYYLVE MGGTGASAGG 540
  541 SNRRKGKAAE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle