YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29840934
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADTGAADV ANGGAPQPRP QNKRLQQTQA QVDEVVDIMR VNMEKVLERD AKLSQLDDRA  60
   61 DALQAGASQF EASAGKLKNK YWWKNMKMNI IIGGVALVLI IALGWYIFGG KKQEAPSAPA 120
  121 ALPPPVQHSA PSHQLPKQPP KHEASHRLRR EAPMFGSATQ

Type	Start	End	Confidence
Cytoplasmic	1	87	0.95
Transmembrane Helix	88	109	0.93
Non-Cytoplasmic	110	160	0.95