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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108707550, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAAALNRL LPLVLIAAVV GRHGASGDGG FPIVFTETKC TPAPTWSRAN DSAYRANVRA  60
   61 LLGGLPSAAA PTGFASTDRS GGAGRDRAFA RGICFGDPPP ALSPQYCLRC LSVAAKELAD 120
  121 GCPAKRRAAV WTDGCFASFA DTSALSPDEA AFHYKIAVGA LVEDDESSAR FTATLAALAE 180
  181 RLAPRAAANA SRMLATATVD VPRVVAGSSR TVQVHSLAQC MPDRPAASCA RCVQESAREL 240
  241 GKCCWNMQSG GVATVIGYNC HLRLDVSVPM TPSVAEPQSI PAPTVSVRTT GGHVRGNVAA 300
  301 VKAAQIVPTQ CTDGLRSFGS PHHFTNLSGP LTTGTILLFR TLPNHAAATR AQTLVEFSTS 360
  361 APPPSPPLKA PKPKSPRFPH APASKSLDMS EKKRRGGAGA GAASGSASKK PRVSTAASYA 420
  421 ESLRSKLRPD ASILATLRSL ASACSKSKPA GSSSSSSSAS KALAAEDDPA ASYIVVADQD 480
  481 SASVTSRINR LVLAAARSIL SGRGFSFAVP SRAASNQVYL PDLDRIVLVR RESARPFANV 540
  541 ATARKATITA RVLSLVHAVL RRGIHVTKRD LFYTDVKLFG DQAQSDAVLD DVSCMLGCTR 600
  601 SSLHVVASEK GVVVGRLTFA DDGDRIDCTR MGVGGKAIPP NIDRVSGIES DALFILLVEK 660
  661 DAAFMRLAED RFYNRFPCII LTAKGQPDVA TRLFLRRLKV ELKLPVLALV DSDPYGLKIL 720
  721 SVYMCGSKNM SYDSANLTTP DIKWLGVRPS DLDKYRVPEQ CRLPMTDHDI KVGKELLEED 780
  781 FVKQNEGWVK ELETMLRTRQ KAEIQALSSF GFQYLTEVYL PLKLQQQDWI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle