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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125585681, gi...
Protein type: Transmembrane
Type Confidence: 0.59
Topology Confidence: 0.43
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGGGGGDAF GSATAPLAWH DFLERMRQPS AADFVKSIKG LAPPQIFGAR HMLDLSSWSR  60
   61 DPRRKACAAI GSCYAARVGS IVCGAGMGDF AGARFSTAFF AFLFLPFKIL DPASITNQYL 120
  121 TFIFIVTFSN RAPDPEHDSA AVQEFLENME GAFRAHTPWA GSSEEELESA GEGLEKYVMT 180
  181 KLFNRVFASV PEDVKSDEEL FEKMSLLQQF IRPENLDIKP EYQSETSWLL AQKELQKINM 240
  241 YKAPRDKLAC ILNCCKVINN LLLNASIVSN ENPPGADEFL PVLIYVTIKK KYKPIIGAVR 300
  301 YRRQSRLVSE AQYFFTNILS AESFIWNIDG ESLSMDERDF QKKMDLARER MLGLSASSEN 360
  361 QDNQNNLDVR EQKSQTLKAS RDSDVNLSLK DNFQGPGLEM RRDSDASSNP VERVQSISDL 420
  421 EKKGAAELLK DDDLNKKIQE YPFLFARSGD LTVADVENLL NSYKQLVLKY VALSQGMGIN 480
  481 LENPPVQSMQ TVSDLVESEE PKNVKNAVNF SEGSSKTSDD IKNDTLYSEV DNTGTQQTAV 540
  541 DPSYQKAQQD EASDQPEHA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle