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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108711930, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKGSQSKS VLNHASPNRQ NAANCEVLNT PESDVMDGEN RSSHVQGGSN VSGVNYGQKT  60
   61 KGIKKNNRSN GISSSGKSDD RASKKQSVDT NYDIGNSGEN DNELSSSTSK ARRDSKRSSR 120
  121 RGCGKNSSIE QTPMPVFAEK VLEKTRCIAC MAASIFRASV MYIIEESKLL LERNRPAITT 180
  181 FMAIVHKGHD YVRSKIKYTY PICRAWMFSA GKLILLLLAV WFNCNIRGFD SLLRLGTNSL 240
  241 LTVLWCSTLS VFAMIGLKKM LILMVIAAAV VAFVGLGFAV LVIAVAAVVI LWLYGSFWTT 300
  301 SGIIILGGAS FFLKHERFAL LVTCLYSMYC AKNYVGWLGL LLSLNLSFIS SDVLVQLLKN 360
  361 NVDNNKSAGS SRNSEQNSGK SGFFGEFRQS SADNTSQSEY AQPSDRGPGD PSTSGAEKEL 420
  421 TSEDEVSRLL NCTDHYSALG FHRYENIDVS LLKREYKKKA MLVHPDKNMG NDKAADAFKK 480
  481 LQNAYEVLLD SLKRKTYDDE LRREELLNYF RRFQSASQKK GGSGIFRQGF SPSEGVDEGP 540
  541 YGLSRRIACK KCGDFHLWIY TGRAKSQARW CQDCNDFHQA KDGDGWVEQS FQPVLFGLLH 600
  601 KPELPHAYVC AESIIFDVTE WFTCQGMRCP ANTHKPSFHV NASLLKQNSG KGSTSAQRGG 660
  661 GIPNGVNMDG GIDEEEFFEW LQNALQSGMF ESFGAQNEPP SPGSGSNAKG SNSSSKKKKK 720
  721 GKKQW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle