YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|255674949, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESPPSIFD RTVRNHPQLT MGFFLGPLGL QLGPFVCMWL KPTRRELCPR LVSSPAKLTD  60
   61 DATPPQPPPQ PQPGDRRRRP RLPDPPRPHG GKAVPLSGLS PQDTCKAVAD PYIECEFMII 120
  121 LIDLILHKTR AYRHLLFNKL RIYSSLDKVL GDALLGNIVF MTMLFLEVQF ILKLSFDIRR 180
  181 YREVLLAVII SSYFKLFLMA MMVWEFPSSV IFFVEISVLS SNTVALRVVT EFSKAHCFGV 240
  241 CFGAHAARYL TERWLLGAP

Type	Start	End	Confidence
Non-Cytoplasmic	1	18	0.65
Transmembrane Helix	19	40	0.81
Cytoplasmic	41	183	0.57
Transmembrane Helix	184	204	0.78
Non-Cytoplasmic	205	259	0.41