YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|108711413, gi...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVLGLRWM NFLPFAVVGL LQINFVLLIS RQGKVRLTKW YSPYTQKERT KVIRELSGLI  60
   61 LTRGPKLCNF VEWKGYKVVY RRYASLYFCM CIDAEDNELE VLEIIHHFVE VLDRYFGSVC 120
  121 ELDLIFNFHK AYYILDEILI AGELQESSKK NVARLIAAQD SLVEAAKEEA SSISNIIAQA 180
  181 TK

Type	Start	End	Confidence
Non-Cytoplasmic	1	8	0.64
Transmembrane Helix	9	30	0.87
Cytoplasmic	31	182	0.67