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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|125545879
Protein type: Globular with Signal Peptide
Type Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPFPTATA AASTTSHLAL LLLLSSSSVF FLYKSLRLRR NNPPSPPPGQ GPAPTPTLLY  60
   61 ASATGTSKAL AAGLSRRLAE AGVTAHPADA AAFDPDDLPS LPLLLLVLPT HDGGAPPPAA 120
  121 AFLARWLEES AADFRAGAAL LSGLRFAVFG VGSRAYGETF NAAARSFSRW LRALGAAEVV 180
  181 AVGEGDVDGG DLEVVFEEWC GRVVRVVKGE EIGEGHNGES DGFDELEEEE SDDDDDEEEV 240
  241 DGGEVDMEDI AGKAPAARRR NGKVEGALSN GGENGVRDMV TPIIRTSLEK QGYKIIGSHS 300
  301 GVKICRWTKS QLRGRGGCYK HSFYGIESHR CMEATPSLAC ANKCVFCWRH HTNPVGKSWK 360
  361 WKMDDPLDIV NAAIDQHTKM VKQMKGVPGV KPERLAEGLS PRHCALSLVG EPIMYPEINV 420
  421 LIDELHRRHI STFLVTNAQF PDKIKTLKPI TQLYVSVDAA TKESLKAVDR PLFSDFWERF 480
  481 LDSLKSLHDK DQRTVYRLTL VKGWNAEEID GYAKLLSLGQ PDFIEIKGVT YCGSSATSKL 540
  541 TMENVPWHSD VKDFSEALAL KSGGVYEVAC EHAHSCCVLL AKVDKFKING KWHTWIDYDR 600
  601 FHELVTSGKP FRSQDYMALT PSWAVYGAEE GGFDPDQSRY KKERRHGAAA LKD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle