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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24431594, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGVSAATGG GAPPGAGASA ANDNINGGNS ASQSSGGPFS GSPDLSQKQG SEFQLAAGKV  60
   61 IRHEGCAEHD HISIGDHGNF LARRKRTGCF SFLPGGPRTL FFYELDHFDG VVTCIPLDDE 120
  121 PVDEGYSFLC FCLGWDKRRS GIFDCVCKTC GHHVPVPYPF PKKKTYACGH GIGEENSRSG 180
  181 IRGTWDATIS KFYVTVGNRA VTGLTAGDWA SDSDNDKFEW DTDGEAETSS APALRNIDAP 240
  241 GPSTRLPQDA NGKANGSGAL VAEFMGMGFP KEMILKAIKE IGDTDTEQLL ELLLTYQAIG 300
  301 GDASVGNCSA SACAPQTLEV DEEEDDTNWD EYDTAGNCDR TPHSDGSGDE DFFQEMSEKD 360
  361 EKMKSLVNMG FPEDEAKMAI DRCGLDAPVA VLVDSIYASQ EAGNGYSANL SDYEDTEFSS 420
  421 FGGRKKTRFV DGSKKRKRYG SGPSGNQVPF DGSHEEPMPL PNPMVGFSLP NERLRSVHRN 480
  481 LPDQALGPPF FYYENVALAP KGVWTTISRF LYDIQPEFVD SKYFCAAARK RGYIHNLPIE 540
  541 NRSPVLPMPP KTISEAFPNT KRWWPSWDPR RQFNCLQTCM ASAKLTERIR CALGRFSDVP 600
  601 TPQVQKYVLD ECRKWNLVWV GKNKVAPLEP DEMEFLLGYP RNHTRGVSRT ERYRALGNSF 660
  661 QVDTVAYHLS VLRDLFPNGM NVLSLFSGIG GAEVALHRLG IHMKTVISVE KSEVNRTILK 720
  721 SWWDQTQTGT LIEIADVRHL TTERIETFIR RFGGFDLVIG GSPCNNLAGS NRHHRDGLEG 780
  781 EHSALFYDYI RILEHSSKTT VGPNKYQNLG SRTEKDSAVR FSHSLPVKSC SPHYVHLTKI 840
  841 SHFNWQISHH SSSKAPTPNP SHKTFATTMR AKLPSSEFSG C

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle