YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55632305
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRALQGGAP ALPGGAGSTT ALLGGGGDGE EPGLPRCGAI GSARRHPAVV AEVSPAYFLF  60
   61 LSERAAAALA ACAAMAKIKA RDLRGKKKEE LLKQLDDLKV ELSQLRVAKV TGGAASKLSK 120
  121 IRVVRKSIAR VLTVINQTQK ENLRKFYKGK KYKPLDLRPK KTRAMRRRLN KHEENLKTKK 180
  181 QQRKERLYPL RKYAVKA

Type	Start	End	Confidence
Signal Peptide	1	21	0.78
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	197	0.91