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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|48716316, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPPESETL RLHASFLCSL AIALLRAGRL SAASHLLSSL PSPPAPLLLR RLIPALATSG  60
   61 LAAAAIRFRP ADPASLNALL YSHCRLRLLR PAIALLRSSR PTTVAYNILL AALSDHAHAP 120
  121 AVLAEMCKRG VPFDGVTVNT LLAGLCRNGQ VDAAAALADR GGGIHALDVI GWNTLIAGYC 180
  181 RVGDTPAALS VADRMTAQGL PMDVVGYNTL VAGFCRAGQV DAARGVLDMM KEAGVDPNVA 240
  241 TYTPFIVYYC RTKGVEEAFD LYEGMVRNGV LLDVVTLSAL VAGLCRDGRF SEAYALFREM 300
  301 DKVGAAPNHV TYCTLIDSLA KAGRGKELLS LLGEMVSRGV VMDLVTYTAL MDWLGKQGKT 360
  361 DEVKDTLRFA LSDNLSPNGV TYTVLIDALC KAHNVDEAEQ VLLEMEEKSI SPNVVTFSSV 420
  421 INGFVKRGLL DKATEYKRMM KERGINPNVV TYGTLIDGFF KFQGQDAALE VYHDMLCEGV 480
  481 KVNKFIVDSL VNGLRQNGKI EEAMALFKDA SGSGLSLDHV NYTTLIDGLF KAGDMPTAFK 540
  541 FGQELMDRNM LPDAVVYNVF INCLCMLGKF KEAKSFLTEM RNMGLKPDQS TYNTMIVSHC 600
  601 RKGETAKALK LLHEMKMSSI KPNLITYNTL VAGLFGTGAV EKAKYLLNEM VSAGFSPSSL 660
  661 THRRVLQACS QSRRLDVILD IHEWMMNAGL HADITVYNTL LQVLCYHGMT RKATVVLEEM 720
  721 LGSGIAPDTI TFNALILGHC KSSHLDNAFA TYAQMLHQNI SPNIATFNTL LGGLESVGRI 780
  781 GEAGTVLIEM EKSGLEPNNL TYDILATGHG KQSNKVEAMR LYCEMVGKGF VPKVSTYNAL 840
  841 ISDFTKAGMM TQAKELFKDM QKRGVHPTSC TYDILVSGWS RIRNGTEVKK CLKDMKEKGF 900
  901 SPSKGTLSFI CRAFSKPGMT WQAQRLLKNL YRV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle