YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46805358, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPGRLRAL ILAVALPLLF LSASEAGTVG INYGRVANDL PNPAAVVQLM KQQGIAQVKL  60
   61 YDTEPTVLRA LANTGIKVVV ALPNEQLLAA ASRPSYALAW VRRNVAAYYP ATQIQGIAVG 120
  121 NEVFASAKNL TAQLVPAMTN VHAALARLSL DKPVKVSSPI ALTALAGSYP PSAGVFREDL 180
  181 AQAVMKPMLD FLAQTGSYLM VNAYPFFAYS GNADVISLDY ALFRPNAGVL DSGSGLKYYS 240
  241 LLDAQLDAVF TAVSKLGNYN AVRVVVSETG WPSKGDAKET GAAAANAAAY NGNLVRRVLS 300
  301 GNAGTPRRPD ADMDVYLFAL FNENQKPGPT SERNYGVFYP NQQKVYDVEF VLGGNSAGGG 360
  361 GSSGKDNGGL GWQDNGGVNA GNAPAGAGGG VKATSTGEAW CVANAMAGEE RLQKALDYAC 420
  421 GPGGADCKAI QPGAACFEPN TMVAHASYAF NDYYQRKGRT IGTCDFAGAA YVVNQAPKMG 480
  481 KCELPSTV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle