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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|115448203, gi...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSDSMADS PRRRNGLLRD QVQLVKRKDT NRYEIVRFPD PLSFEKGFFV MIRACQLLVQ  60
   61 HNEGMIFVGV AGPSGAGKTV FTEKVLNFMP GVAVISMDNY NDASRIVDGN FDDPRLTDYD 120
  121 TLLENIHGLK EGRSVQVPIY DFKMSCRTGY RTVDVPSSRI VIIEGIYALS EKLRSVLDLR 180
  181 VSVTGGVHFD LVKRVLRDIQ RAGQEPEEII HQISETVYPM YKAFIEPDLQ TAHIKIINKF 240
  241 NPFSGFQNPM YILKSPRTIT PTDIKVALGE DHTESIEETY DIYLLPPGED PESCQSYLRM 300
  301 RNREGKYNLM FEEWVTDNPF IISPRITFEV SVRLLGGLMA LGYTIAAILK RKSRVFSDGK 360
  361 ATVKIDWLEQ LNRNYIQVQG RDRNHVKFVA EKLGLDGSYI PRTYIEQIQL EKLINDVMAL 420
  421 PEDLKTKLSI DDELVSSPKE ALSRVSADKR NKHLKSGLSH SYSTHGDKNI VKLSKLTETN 480
  481 RRFGSGRAPE PPAINQGAIT QLSEQISTLN ERMDEFTSRV EELNCKFAIK KSSTSQQNLA 540
  541 LPNETCNGSA PTNLFVSHLG NGTLIPHSSS SNQLLKESPI VDEINAISRG QRQVIHQLDN 600
  601 LTSLLHEHLA LTRQGNAVRR NGILEMDMSI CPLIALTIGG FGYLVFKSLN RS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle