YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GT2_ORYSI
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQEGMGYNN GKGGGGGGGG LPMTAPRPRG ASPLSSHGHH HRSRKIHRTF NNVKITVLCG  60
   61 LVTILVLRGT IGLNLSLPNQ PTDADALAGA KAVEDIDRIL REIRSDGGAD DDAAAAGDLA 120
  121 GSFNATALNA TEAAAAYASA VERYALGPKI SDWDGQRRRW LRQNPGFPST VAGGKPRILL 180
  181 VTGSQPGPCD NPLGDHYLLK TTKNKIDYCR LHGIEIVHNL AHLDTELAGY WAKLPLLRRL 240
  241 MLSHPEVEWI WWMDSDALFT DMAFELPLSR YQDRNLIIHG YQDLLFEKHS WIALNTGSFL 300
  301 FRNCQWSLDL LDAWAPMGPK GFIRDEAGKI LTANLKGRPA FEADDQSALI YLLLSQKEKW 360
  361 MNKVFIENSY YLHGFWAGLV DKYEEMMENH HPGLGDERWP FVTHFVGCKP CGSYGDYPVE 420
  421 RCLRSMERAF NFADNQVLRL YGFAHKGLES PKIKRVRNQT TKPIDDKENL DVKAKISTTS 480
  481 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle