YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|115447059, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAGYYNCK KNDGGICGGV CGGSEHGSKA ILSMSRLKCA LRGFDLRALL ILLIGVPALI  60
   61 FIIYVHGQKV TYFLRPIWEK PPKPFNVLPH YYHENVSMAN LCKLHGWKVR ETPRRVFDAV 120
  121 LFSNELDILD IRWHELSPYV SEFVLLESNS TFTGLKKDLH FKENRQRFEF AESRLTYGMI 180
  181 GGRFVKGENP FVEESYQRVA LDQLIKIAGI TDDDLLIMSD VDEIPSGHTI NLLRWCDDTP 240
  241 EVLHLQLRNY LYSFQFLLDD KSWRASIHRY RAGKTRYAHF RQTDDLLADS GWHCSFCFRH 300
  301 INDFVFKMQA YSHVDRIRFK YFLNPKRIQH VICQGADLFD MLPEEYTFQE IIAKLGPIPS 360
  361 TFSAVHLPAY LLEKMDQYRY LLPGNCMRES G

Type	Start	End	Confidence
Cytoplasmic	1	43	0.98
Transmembrane Helix	44	67	0.90
Non-Cytoplasmic	68	391	0.99