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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|47848114, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDDLGYPP GMAGLDAMAG LGGLGGMGGL GGLGGMGGLG GLGGMGGLGG LGGFGGGGME  60
   61 DLYGGGGGAG GEEGGEGPYA AEMEVGEEKE IGKEGLRKKL VKEGEGWERP DAGDEVQVHY 120
  121 TGTLLDGTKF DSSRDRDAPF KFTLGQGQVI KGWDLGIKTM KKGENAIFTI PPELAYGEDG 180
  181 SPPVIPPNAT LQFDVELISW ESVKDICKDG GILKKVLAEG TKWENPRDRD EVFVKYEVRL 240
  241 EDGTVVAESD GVEFTVKDGH FCPAISKAVK TMKKNEKALL TVKPQYGFGE QGRPAARDEA 300
  301 AIPPNATLHI NLELVSWKAV TEIGNDKKIL KKILHEGEGY ERPSDCTLVR VKLIGKLEDG 360
  361 TIFVTRGHDG DEPFEFKTDE DQVVEGLDKA VLSMKKGEVA LVTIPPEYAF GSDETRQDLS 420
  421 VVPPNSTVYY EVELVSFDKE KESWDMKENT EKIEAAAKKK DEGNAWFKME KYARASKRYG 480
  481 KALNFIQYDS SFSEEEKQLS KPLKVSCKLN NAACKLKLKD YKEAKELCTE VLELDSMNVK 540
  541 AFYRRAQAHM YLVDFDLAEL DIKKALEIDP DNRDVKMGYR RLKEKVKEQK RKETKLYGNM 600
  601 ISKLSKLEDS ETEGGTTQAP SKKHGLWPLT ALLRRLFTRS DGSKESMLWL VLRLLIPVVL 660
  661 LVAVCVAFYM RSGPPEVDCI NC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle